CDS

Accession Number TCMCG007C04459
gbkey CDS
Protein Id XP_033142574.1
Location join(258561..258768,259051..259545,259657..262619)
Gene LOC103850840
GeneID 103850840
Organism Brassica rapa

Protein

Length 1221aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033286683.1
Definition coatomer subunit alpha-2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K05236        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTGACGAAGTTCGAGACAAAGAGTAACAGAGTGAAGGGCCTCACCTTCCACCCTAAACGGCCATGGATCCTCGCCAGTTTGCACAGTGGTGTGATCCAGCTCTGGGATTACCGTATGGGTACTTTGATCGATCGATTCGACGAGCATGAAGGTCCAGTTCGTGGTGTTCATTTTCACAATTCTCAGCCTCTCTTCGTCTCCGGAGGTGATGATTACAAGATCAAAGTCTGGAACCACAAAACGCACAGGTGCCTTTTCACTCTTCTCGGCCATCTCGACTACATCCGCACTGTCCAATTCCACCACGAGAACCCCTGGATTGTGAGTGCTAGTGACGATCAGACTATCCGCATTTGGAACTGGCAGTCACGGACTTGTATTTCTGTGCTTACTGGCCACAATCACTATGTTATGTGCGCTTCTTTCCATCCTAAAGAAGACCTTGTCGTCTCTGCATCTCTGGATCAGACTGTCCGTGTCTGGGATATTGGTTCTCTTAAGAAGAAGACTGTGTCTCCTGCTGATGACCTCATGCGATTCACACAGATGAACTCTGATCTTTTTGGTGGTGTTGACGCTATTGTTAAGTACGTCCTCGAAGGTCATGATAGAGGAGTAAACTGGGCTTCCTTTCATCCCACTCTTCCTCTCATCGTCTCTGGTGCAGATGACCGCCAAGTGAAGCTGTGGCGTATGAATGAAACTAAAGCTTGGGAGGTGGATACACTGCGAGGCCACATGAATAATGTTTCATCTGTTATGTTCCATGCAAAACAGGACATTATTGTTTCCAACTCTGAGGATAAAAGCATTCGTGTCTGGGATGCTACCAAGCGAACTGGAATCCAAACTTTTCGCCGTGAACATGATCGTTTCTGGATTCTTGCAGTTCACCCTGAGATTAATTTACTGGCAGCGGGGCATGACAACGGTATGATCGTCTTCAAGCTCGAGAGAGAACGTCCTGCATTTGCTTTGAGTGGCAATTCTTTGTTCTATACCAAAGATAGATTTTTGAGGTACTACGATTGTTCAACTCAGAAAGATTCCCAAGTTATCCCTATACGGCGTCCTGGTACTCCAAGCTTGAATCAAAGTCCAAGGACTCTATCATACAGTCCGACGGAAAATGCGGTTTTGATCTGCTCAGATTTAGATGGTGGTTCTTACGAGTTGTACATCATACCGAAAGATAGTGTTGGCAGAAGTGACGTTGTGCAAGATGCAAAGAGGGGGACAGGTGGTTCTGCGGTATTCATTGCCCGTAACCGGTTTGCTGTTCTTGAGAAAAGCACCAGCCAGGTGCTAGTCAAGAATCTCAAGAATGAGGTGGTTAAAAAGAGTTCTCTGCCTATACCCACAGATGCTATCTTTTATGCTGGGACTGGAAATTTGCTCTGTAGATCTGAGGATAAAGTGGTTATATTTGACCTTCAGCAAAGGCTTGTTCTTGGTGAACTTCAGACACCGTTTGTTAGGTATGTTGTTTGGTCTAACGATATGGAGAGTGTTGCTTTGCTCAGCAAACACACTATCATCATTGCAAGCAAAAAACTTGTCCTCCAGTGCACACTTCATGAGACAATACGTGTGAAAAGTGGAGCTTGGGATGACAATGGTGTCTTCATTTACACAACTTTGAACCATATCAAGTACTGTCTTCCTAATGGAGATAGTGGTATCATCCGAACGCTGGATGTCCCTATCTATATCACCAAGGTTTCTGGAAATACGATCTTCTGCTTGGACCGGGATGGGAAAAACAGGGCCATCACCATCAATGCAACTGAATACATTTTCAAGCTTGCACTGCTGAGGAAGAAATATGATCATGTCATGGGCATGATAAAGAACTCCCAGCTATGTGGACAGGCTATGATTGCTTACCTGCAGCAGAAAGGATTCCCTGAAGTTGCCCTCCATTTTGTTGAAGACGAGAGAGTCCGTTTCAACCTGGCTCTTGAAAGTGGCAACATTAGCGTCGCTGTTGCATCCGCTACAGAGATAAATGAGAAAGAGCAGTGGTATAGACTTGGGGTGGAGGCTCTTCGCCAAGGTAATGCTGGAATTGTTGAATTTGCGTACCAGCAAACAAAGAACTTTGAGAGATTATCTTTTCTATATCTCATTACTGGTAAGTTGGACAAGCTTTCCAAGTTGATGAAGATTGCGGAAGTGAAGAACAATGTGATGGGTCAGTTCCACAATGCTCTCTACCTAGGAGATGTTAAAGAGCGTGTCAAGATACTTGAGAATGCTGGTCATTTACCTCTCGCTTATATCACTGCATCGGTTCATGGTTTAAAGGATGTTGCTGAGAGACTGGCGACTGAGCTAGGAGAGAACGTGCCTTCATTGCCTGAAGGGAAAACTCCATCGCTTCTAATGCCACCATCTCCTGTCATGTGTGGTGGTGATTGGCCTCTTCTAAGAGTGATGAAGGGAATATTTGAAGGCGGGCTTGAGAGTGCAGCCAGGGGAGGTGCTGTTGATGAAGAAGAAGAAGAAGATGCTGGTGGTGACTGGGGGGATGCACTTGACATGGTCGATGTTGATGGAATGGAGAACAGAGACATCGATGCCATTTTGGAGGAAGCAGAAAGAGGAGAAGACGAAAATGATGAAGAAGGTGGATGGGAGGAACTTGAGGGCTTAGACCTCCCACCAGAGCTTGACACTCCTAAGGCCTCTGCTAACGCACGTTCATCCGTCTTCGTGACACCTACTCAAGGTATGCCCGTAAGTCATATTTGGAGCCAGAAGTCATCCCTTGCTGCTGAGCAAGCTGCAGCAGGAAGCTTCGACACTGCAATGCGTCTGCTCAACAGGCAGCTTGGTATAAAGAACTTTGCGCCTTTGAAATCGATGTTTATTGATTTGTTCAGTGGCAGCCAAAGCTACCTGCGTGCTTTTTCTTCATCGCCTGTGGTTTCACTTGCCATTGAGCGAGGATGGAGCGAGTCTTCTAGTCCCAACGTCCGTGGCCCACCATCTCTTGTTTATGATTTCTCCCAGCAAGAAGAGAAGCTCAAATCCGGCTATAAAGCTACAACAAGTGGGAAATTGACTGAGGCTCTCCGGCTCTTCCTCTCTATCCTCCACACCATCCCTCTTGTGGTGGTCGAGTCAAGAAGCGAAGTCGATGAGGTAAAGGAACTGGTCACTATCGTCAAAGAATATGTTCTCGGTCTTAAAATGGAGCTTAAGAGAAGAGAGACGAAAGATGATCCAGTGAGGCAGCAGGAGCTCGCTGCTTACTTCACTCACTGCAACCTCCAACTACCTCACTTACGACTCGCCCTGTTTAGTGCAATGGGTGTCTGCTACAAATCAAAGAACCTCGCCACTGCCTATACCTTCGCCAAAAGATTGTTGGAAACCAACCCAATGGAGAGCCAGGCCAAAACAGCTCGACAGATTGTCCAAGCCGCTGAACGCAATATGACTGATACAACCGAGCTCAACTACGACTTCAGAAACCCGTTCGTGATATGTGGGTCAACCTATGTGCCAATCTACAGAGGTCAGAAAGACGTGTCCTGTCCATACTGCACCGCCAGGTTTGTTCCAAGCCAGCAAGGAAACATATGCGGGGTCTGTGATCTTGCAGTCATTGGCGCAGACGCATCTGGTTTGGTATGCTCTCCTTCTCAAGTTCGTTGA
Protein:  
MLTKFETKSNRVKGLTFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNHKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLKKKTVSPADDLMRFTQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNGMIVFKLERERPAFALSGNSLFYTKDRFLRYYDCSTQKDSQVIPIRRPGTPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSNDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYIFKLALLRKKYDHVMGMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERVRFNLALESGNISVAVASATEINEKEQWYRLGVEALRQGNAGIVEFAYQQTKNFERLSFLYLITGKLDKLSKLMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLKDVAERLATELGENVPSLPEGKTPSLLMPPSPVMCGGDWPLLRVMKGIFEGGLESAARGGAVDEEEEEDAGGDWGDALDMVDVDGMENRDIDAILEEAERGEDENDEEGGWEELEGLDLPPELDTPKASANARSSVFVTPTQGMPVSHIWSQKSSLAAEQAAAGSFDTAMRLLNRQLGIKNFAPLKSMFIDLFSGSQSYLRAFSSSPVVSLAIERGWSESSSPNVRGPPSLVYDFSQQEEKLKSGYKATTSGKLTEALRLFLSILHTIPLVVVESRSEVDEVKELVTIVKEYVLGLKMELKRRETKDDPVRQQELAAYFTHCNLQLPHLRLALFSAMGVCYKSKNLATAYTFAKRLLETNPMESQAKTARQIVQAAERNMTDTTELNYDFRNPFVICGSTYVPIYRGQKDVSCPYCTARFVPSQQGNICGVCDLAVIGADASGLVCSPSQVR